DNA Binding Motif
| Accessions: | UN0157.1 (JASPAR 2024), MA1709.1 (JASPAR 2024) |
| Names: | ZIM3 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 15 |
| Consensus: | armAACAGAAAcCya |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 7997 2113 4156 2954 a 02 5508 3390 5701 2621 r 03 5336 8338 1327 2219 m 04 16896 118 106 100 A 05 16502 107 229 382 A 06 853 15856 435 76 C 07 17067 38 39 76 A 08 194 72 16877 77 G 09 15879 840 165 336 A 10 16933 90 110 87 A 11 14228 306 575 2111 A 12 2482 7474 3674 3590 c 13 1365 15232 109 514 C 14 2931 5918 848 7523 y 15 7603 4141 2389 3087 a |
| Type: | Heterodimer |
| Binding TFs: | Q96PE6 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) Q96PE6 |
| Binding Sites: | MA1709.1.1 / UN0157.1.1 MA1709.1.11 / UN0157.1.10 UN0157.1.11 MA1709.1.12 / UN0157.1.12 MA1709.1.13 / UN0157.1.13 MA1709.1.14 / UN0157.1.14 MA1709.1.15 / UN0157.1.15 MA1709.1.16 / UN0157.1.16 MA1709.1.17 / UN0157.1.17 MA1709.1.18 / UN0157.1.18 MA1709.1.19 / UN0157.1.19 MA1709.1.2 / UN0157.1.2 MA1709.1.20 / UN0157.1.20 MA1709.1.3 / UN0157.1.3 MA1709.1.4 / UN0157.1.4 MA1709.1.6 / UN0157.1.5 MA1709.1.7 / UN0157.1.6 MA1709.1.8 / UN0157.1.7 MA1709.1.9 / UN0157.1.8 MA1709.1.10 / UN0157.1.9 MA1709.1.5 |
| Publications: | Schmitges FW, Radovani E, Najafabadi HS, Barazandeh M, Campitelli LF, Yin Y, Jolma A, Zhong G, Guo H, Kanagalingam T, Dai WF, Taipale J, Emili A, Greenblatt JF, Hughes TR. Multiparameter functional diversity of human C2H2 zinc finger proteins. Genome Res 26:1742-1752 (2016). [Pubmed] |
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