DNA Binding Motif

						

			
Accessions: FOXD2_4 (HT-SELEX2 May2017)

			
Names: FOXD2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: wwACAATAAyAttw
Weblogo: 
PSSM: P0      A      C      G      T
01   2223   1014    229   1385      w
02   4851     83      9   2516      w
03   4851      9    256     87      A
04    393   4851   1553    100      C
05   4851    113    855      7      A
06   4851    348      0     20      A
07     38    307     13   4851      T
08   4851     13      4      0      A
09   4851      0     21     73      A
10      0   3036      0   1815      y
11   4851      3    730     55      A
12   1443    537    418   3408      t
13   1032    607    415   3819      t
14   1815    612    972   1452      w
Binding TFs: FOXD2 (Fork head domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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