DNA Binding Motif

						

			
Accessions: M0216 (AthalianaCistrome v4_May2016)

			
Names: T23356;, TGA2.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 20
Consensus: rrTGACGTCAkCawywwykw
Weblogo: 
PSSM: P0      A      C      G      T
01    204     69    184    142      r
02    286     68    237      8      r
03      0      0      0    599      T
04      0      2    591      6      G
05    599      0      0      0      A
06      0    583      0     16      C
07     17      1    581      0      G
08      1      0      0    598      T
09     71    528      0      0      C
10    593      0      2      4      A
11      2     90    199    308      k
12     51    421     54     73      C
13    286     53    112    148      a
14    151     83     86    279      w
15    144    183     68    204      y
16    162    132    145    160      w
17    155    142    100    202      w
18    119    181     99    200      y
19    149    101    191    158      k
20    155    112     96    236      w
Binding TFs: T23356 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.