DNA Binding Motif

						

			
Accessions: PRRX2_methyl_6 (HT-SELEX2 May2017)

			
Names: PRRX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: ctcrTTAa
Weblogo: 
PSSM: P0      A      C      G      T
01    774   1200    540    774      c
02    671    469    818   1974      t
03    329   1974    255    403      c
04   1648     88   1974      0      r
05    143    556    103   1974      T
06    340    147     46   1974      T
07   1974      7    154    134      A
08    911    228    383    452      a
Binding TFs: PRRX2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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