DNA Binding Motif

						

			
Accessions: UN0364.1 (JASPAR 2024), MA1219.2 (JASPAR 2024)

			
Names: ERF011
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: mwyCACCGACmahw
Weblogo: 
PSSM: P0      A      C      G      T
01    732    765    349    600      m
02    811    393    524    718      w
03    412    807    326    901      y
04    139   2130     96     81      C
05   2305      7     98     36      A
06     13   2411     10     12      C
07      8   2427      5      6      C
08     23     12   2401     10      G
09   2115     74     47    210      A
10     10   2394     14     28      C
11    841   1106    275    224      m
12   1197    437    268    544      a
13    733    629    367    717      h
14    749    508    526    663      w
Type: Heterodimer
Binding TFs: Q9SNE1 (AP2 domain)
Q9SNE1
Binding Sites: MA1219.2.1 / UN0364.1.1
UN0364.1.10
UN0364.1.11
MA1219.2.8 / UN0364.1.12
UN0364.1.13
UN0364.1.14
UN0364.1.15
MA1219.2.9 / UN0364.1.16
MA1219.2.10 / UN0364.1.17
MA1219.2.11 / UN0364.1.18
MA1219.2.13 / UN0364.1.19
UN0364.1.2
MA1219.2.14 / UN0364.1.20
MA1219.2.2 / UN0364.1.3
MA1219.2.3 / UN0364.1.4
MA1219.2.4 / UN0364.1.5
UN0364.1.6
MA1219.2.5 / UN0364.1.7
MA1219.2.6 / UN0364.1.8
MA1219.2.7 / UN0364.1.9
MA1219.2.12
MA1219.2.15
MA1219.2.16
MA1219.2.17
MA1219.2.18
MA1219.2.19
MA1219.2.20
			
Publications: Medina J, Bargues M, Terol J, Pérez-Alonso M, Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression Is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol 119:463-70 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.