DNA Binding Motif

						

			
Accessions: HOXA11_3 (HT-SELEX2 May2017)

			
Names: HOXA11
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gGTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01    905    591   2174    481      g
02    902    333   3248      9      G
03     21     59     13   4150      T
04     40   4150      0     55      C
05    533      0   4150      9      G
06      0     36      0   4150      T
07   4150      0     38    935      A
08   4150      0      7     56      A
09   4150     78     18     50      A
10   4150    712    462   1038      a
11    954   1312    504   1380      y
Binding TFs: HOXA11 (Homeobox domain, Protein of unknown function (DUF3528))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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