DNA Binding Motif

						

			
Accessions: RFX4_2 (HT-SELEX2 May2017)

			
Names: RFX4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: cGTTrYCATGRyAACs
Weblogo: 
PSSM: P0      A      C      G      T
01   3995  19489  10096   7585      c
02     93      0  41165      0      G
03      0      0      0  41165      T
04  12883   3100      0  41165      T
05  11747    364  29418   3530      r
06      0  41165     87  14631      Y
07      0  41165      0   7246      C
08  41165      0    631      0      A
09    162    738      0  41165      T
10   7536      0  41165      2      G
11  14872     87  41165      0      R
12   3474  29632    468  11533      y
13  41165      0   2921  12962      A
14  41165      0      0      0      A
15      0  41165      0    182      C
16   7649  10299  19109   4107      s
Binding TFs: RFX4 (RFX DNA-binding domain, Poxvirus D5 protein-like)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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