DNA Binding Motif

						

			
Accessions: RARG_6 (HT-SELEX2 May2017)

			
Names: RARG
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: rrGGTCAcg
Weblogo: 
PSSM: P0      A      C      G      T
01   2035    760   2305    799      r
02   4147    903   1751    130      r
03      0     29   5899    263      G
04      0      0   5899      0      G
05    282      0     40   5899      T
06      0   5899      0      0      C
07   5899      0    694      0      A
08   2524   3565   1874   2333      c
09    893    838   3641    527      g
Binding TFs: RARG (Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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