DNA Binding Motif

						

			
Accessions: LHX2_DBD_2 (HumanTF 1.0)

			
Names: LHX2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 15
Consensus: yAATTAmgCTAATTr
Weblogo: 
PSSM: P0      A      C      G      T
01   1361  27893   1421  39447      y
02  52013  10100   2909   2307      A
03  55533    601   2439   1133      A
04   1221   1008   1662  60411      T
05   1762   2304   1369  60102      T
06  51597    708   8773   2102      A
07  22008  22559  10793  11491      m
08  17844  16843  33124   6021      g
09   6226  68235   8871  12571      C
10   3335   3643    595  57114      T
11  55694   1665   1321    828      A
12  56625    326    711    399      A
13    596   1296    475  59072      T
14   2045   1391  11648  56331      T
15  38656    333  26176   1209      r
Binding TFs: LHX2_DBD (Homeobox domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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