DNA Binding Motif

						

			
Accessions: M0682 (AthalianaCistrome v4_May2016)

			
Names: ANAC057.DAP, T11447;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: wrCkTGtrkhaCAMGyA
Weblogo: 
PSSM: P0      A      C      G      T
01    207      7    112    274      w
02    286     44    230     40      r
03     22    578      0      0      C
04      0      0    323    277      k
05      0      0      0    600      T
06     76     15    506      3      G
07    140    126     42    292      t
08    179     90    189    142      r
09    135    106    205    154      k
10    179    164     97    160      h
11    311     58    104    127      a
12      4    456    103     37      C
13    600      0      0      0      A
14    442    158      0      0      M
15      0      0    600      0      G
16    110    223    115    152      y
17    428     92      8     72      A
Binding TFs: T11447 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.