DNA Binding Motif

						

			
Accessions: TEAD4_HOXA13_1 (HumanTF2 1.0)

			
Names: TEAD4_HOXA13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: CTcGTAAATwCcr
Weblogo: 
PSSM: P0      A      C      G      T
01     89    667    168     12      C
02     30    142     27    524      T
03    176    667     11    165      c
04    154      5    512      8      G
05      0     12      9    667      T
06    667      7      5     14      A
07    667     33      2      0      A
08    667     15      0      1      A
09     59     66      9    667      T
10    381     20     64    286      w
11    112    667    113     46      C
12     98    667     55    175      c
13    258     82    193    133      r
Type: Heterodimer
Binding TFs: HOXA13_TF2 (Homeobox domain, Hox protein A13 N terminal)
HOXA13_Full (Homeobox domain, Hox protein A13 N terminal)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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