DNA Binding Motif

						

			
Accessions: POU6F2_DBD_2 (HumanTF 1.0)

			
Names: POU6F2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 16
Consensus: wTAATkAGCTmATTAw
Weblogo: 
PSSM: P0      A      C      G      T
01    389    306    145    571      w
02      0      1      1   1683      T
03   1025      2      7     82      A
04   1021      4      3      0      A
05     22     22     81   1638      T
06     18     39    885    790      k
07   1042      9      3     23      A
08     27    185   1618     99      G
09     57    933     65     53      C
10     36     10     11   1614      T
11    650    375     15     31      m
12   1082     23      8     11      A
13      8      0      0   1550      T
14     49      1      0   1515      T
15   1090      0      0      5      A
16    613     87    255    396      w
Binding TFs: POU6F2_DBD (Homeobox domain, Pou domain - N-terminal to homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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