DNA Binding Motif

						

			
Accessions: M0244 (AthalianaCistrome v4_May2016)

			
Names: At5g62940.DAP, T23263;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: raaaaaarrAAAAAGtwrawa
Weblogo: 
PSSM: P0      A      C      G      T
01    285     67    153     95      r
02    306     61    111    122      a
03    300     53    109    138      a
04    315     54    123    108      a
05    330     55    113    102      a
06    333     53    118     96      a
07    319     66    105    110      a
08    242     73    154    131      r
09    150    139    208    103      r
10    434     56     72     38      A
11    487      0      0    113      A
12    600      0      0      0      A
13    600      0      0      0      A
14    597      0      3      0      A
15      0      0    600      0      G
16     88     83    149    280      t
17    296     36    104    164      w
18    394     13    153     40      r
19    403     65     52     80      a
20    292     71     87    150      w
21    307     45    101    147      a
Binding TFs: T23263 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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