DNA Binding Motif

						

			
Accessions: UN0365.1 (JASPAR 2024)

			
Names: GT-2
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 12
Consensus: awGGTAAAAAww
Weblogo: 
PSSM: P0      A      C      G      T
01   1752    404    784    905      a
02   1190    854    587   1214      w
03    126     22   3652     45      G
04    148     18   3664     15      G
05     49     24     19   3753      T
06   3227     67    202    349      A
07   3723     25     49     48      A
08   3530     63     96    156      A
09   3348     52     47    398      A
10   3027    173    209    436      A
11   1494    467    543   1341      w
12   1449    437    680   1279      w
Type: Heterodimer
Binding TFs: Q39117 (Myb/SANT-like DNA-binding domain, Myb/SANT-like DNA-binding domain)
Q39117
Binding Sites: UN0365.1.3
UN0365.1.15
UN0365.1.18
UN0365.1.19
UN0365.1.1
UN0365.1.10
UN0365.1.11
UN0365.1.12
UN0365.1.13
UN0365.1.14
UN0365.1.16
UN0365.1.17
UN0365.1.2
UN0365.1.20
UN0365.1.4
UN0365.1.5
UN0365.1.6
UN0365.1.7
UN0365.1.8
UN0365.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.