DNA Binding Motif

						

			
Accessions: RUNX3_DBD_1 (HumanTF 1.0)

			
Names: RUNX3
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 16
Consensus: wrACCGCAAACCrCAr
Weblogo: 
PSSM: P0      A      C      G      T
01    953    496    279   1026      w
02   1661    371    922    374      r
03   2060    203    232     35      A
04     32   2920     41     24      C
05     31   2905     59     28      C
06    703     57   3087     59      G
07     41   2873     60     59      C
08   2176     60     67    172      A
09   2061     64    536     72      A
10   2173    150    199     52      A
11    137   2836     94     58      C
12     82   2833     84     77      C
13    914    154   2023     77      r
14    122   2804    105    115      C
15   2088    260    442    190      A
16   1189    364    761    415      r
Binding TFs: RUNX3_DBD (Runt domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.