DNA Binding Motif

						

			
Accessions: HOXC10_3 (HT-SELEX2 May2017)

			
Names: HOXC10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: srTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01    549    805   1113    474      s
02    964    445   1977      2      r
03     14     64      0   2941      T
04     26   2941      0     19      C
05    756      0   2941      0      G
06      0      0      0   2941      T
07   2941      0      0    806      A
08   2941      1      0     44      A
09   2941     50      4     66      A
10   2941   1503    811   1491      a
11    508   1130    544    760      y
Binding TFs: HOXC10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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