DNA Binding Motif

						

			
Accessions: CLOCK_methyl_1 (HT-SELEX2 May2017)

			
Names: CLOCK
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rmCAyGyGyh
Weblogo: 
PSSM: P0      A      C      G      T
01   3082    760   3589   1777      r
02   6073   3135   2310    772      m
03    954   9208    122    140      C
04   9208      0    977      0      A
05      0   3145      0   6063      y
06   2053      0   9208      0      G
07      0   3995      0   5213      y
08    769    223   9208    608      G
09    667   3445   1335   5764      y
10   2558   2541   1508   2601      h
Binding TFs: CLOCK (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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