DNA Binding Motif

						

			
Accessions: HOXA9_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXA9
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rTCGTwAays
Weblogo: 
PSSM: P0      A      C      G      T
01   1248    570   2148      1      r
02    546    768     62   3396      T
03    209   3396      0    124      C
04    958      0   3396      0      G
05      0      0      0   3396      T
06   3396     78     28   2263      w
07   3396     26      0    233      A
08   3396   1032    179   1035      a
09    823    911    706    955      y
10    694    953    987    761      s
Binding TFs: HOXA9 (Homeobox domain, Hox9 activation region    )
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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