DNA Binding Motif

						

			
Accessions: M0470 (AthalianaCistrome v4_May2016)

			
Names: LBD18.DAP, T08045;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: wytycksCggawTTTCcGs
Weblogo: 
PSSM: P0      A      C      G      T
01    167    120     84    229      w
02    133    171     60    236      y
03    145     79    130    246      t
04    105    248     87    160      y
05     90    346     16    148      c
06     71     41    232    256      k
07     17    403    170     10      s
08     19    580      1      0      C
09    104     38    365     93      g
10     62    103    297    138      g
11    293     74    131    102      a
12    154     11     49    386      w
13     46     76      7    471      T
14     55    127      2    416      T
15     63    117      6    414      T
16     85    409     65     41      C
17     77    407     47     69      c
18      0      0    571     29      G
19     20    204    352     24      s
Binding TFs: T08045 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.