DNA Binding Motif
| Accessions: | MA2019.1 (JASPAR 2024) |
| Names: | HSFA1B |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | taGAArCTTCta |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1802 1746 1029 3083 t 02 3819 983 1728 1130 a 03 155 105 7327 73 G 04 7359 86 95 120 A 05 7308 54 124 174 A 06 3914 804 1940 1002 r 07 216 6814 401 229 C 08 345 133 77 7105 T 09 122 108 101 7329 T 10 95 7300 122 143 C 11 1158 1761 990 3751 t 12 3033 1204 1541 1882 a |
| Type: | Heterodimer |
| Binding TFs: | O81821 (HSF-type DNA-binding) O81821 |
| Binding Sites: | MA2019.1.1 MA2019.1.10 MA2019.1.11 MA2019.1.12 MA2019.1.13 MA2019.1.14 MA2019.1.15 MA2019.1.16 MA2019.1.17 MA2019.1.18 MA2019.1.19 MA2019.1.2 MA2019.1.20 MA2019.1.3 MA2019.1.4 MA2019.1.5 MA2019.1.6 MA2019.1.7 MA2019.1.8 MA2019.1.9 |
| Publications: | Huang YC, Niu CY, Yang CR, Jinn TL. The Heat Stress Factor HSFA6b Connects ABA Signaling and ABA-Mediated Heat Responses. Plant Physiol 172:1182-1199 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.