DNA Binding Motif

						

			
Accessions: SIX2_methyl_3 (HT-SELEX2 May2017)

			
Names: SIX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: vsrTAwCryr
Weblogo: 
PSSM: P0      A      C      G      T
01    577    541    419    123      v
02    310   1117    694    447      s
03    514    218   1117     89      r
04     35    141    127   1117      T
05   1117    122    199     67      A
06    624     79    170   1117      w
07     44   1117     92    146      C
08    563     86    555     96      r
09    308    495    275    622      y
10    292    242    330    254      r
Binding TFs: SIX2 (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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