DNA Binding Motif

						

			
Accessions: MA0872.1 (JASPAR 2024)

			
Names: TFAP2A, TFAP2A(var.3)
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 13
Consensus: tGCCCysrGGGCa
Weblogo: 
PSSM: P0      A      C      G      T
01    262    154    134    837      t
02      0    357   1359      0      G
03      0   1368      0      0      C
04      0   1373      0      0      C
05     48   1115     95    131      C
06     55    524    212    650      y
07    188    506    546    251      s
08    556    224    538     75      r
09    192     66   1420     53      G
10      0      0   1911      0      G
11      0      0   1903      0      G
12      0   1099    366      0      C
13    721    102    198    260      a
Type: Heterodimer
Binding TFs: P05549 (Transcription factor AP-2)
P05549
			
Publications: Eckert D, Buhl S, Weber S, Jäger R, Schorle H. The AP-2 family of transcription factors. Genome Biol : (2005;6(13):246.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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