DNA Binding Motif

						

			
Accessions: UN0097.1 (JASPAR 2024)

			
Names: sub-1
Organisms: Neurospora crassa
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: csCGATCGrtc
Weblogo: 
PSSM: P0      A      C      G      T
01    224    326    224    224      c
02    203    299    391    105      s
03    225    724     24     24      C
04      0      0    999      0      G
05    999      0      0      0      A
06      0      0      0    999      T
07      0    999      0      0      C
08      0      0    897    102      G
09    347    117    509     25      r
10    144    144    144    567      t
11    225    324    225    225      c
Type: Heterodimer
Binding TFs: V5IL92 (GATA zinc finger)
V5IL92
			
	
			


			

				

				
				
				
				

			

			

		

	
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