DNA Binding Motif

						

			
Accessions: 4r2q_A (3D-footprint 20231221)

			
Names: Wilms tumor protein, isoform 4/CRA_a
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA
Length: 9
Consensus: aGCCCACGC
Weblogo: 
PSSM: P0      A      C      G      T
01     45     16     16     19      a
02     10     10     66     10      G
03      0     96      0      0      C
04      2     90      2      2      C
05      3     85      3      5      C
06     96      0      0      0      A
07      8     72      8      8      C
08      0      0     96      0      G
09      9     67      9     11      C
Binding TFs: 4r2q_A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 4r2q_B
4r2q_C
			
Publications: Hashimoto H, Olanrewaju Y.O, Zheng Y, Wilson G.G, Zhang X, Cheng X. Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence. Genes & development 28:2304-13 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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