DNA Binding Motif

						

			
Accessions: Lhx8_DBD_3 (HumanTF 1.0)

			
Names: Lhx8
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 12
Consensus: TrATTGCAATyA
Weblogo: 
PSSM: P0      A      C      G      T
01    387    191     71   7071      T
02   3840     34   3231     50      r
03   7071     18     47     16      A
04    112     71    109   7071      T
05    120     55    114   7071      T
06    892     70   7071     36      G
07     67   7071     45    618      C
08   7071     96     57     61      A
09   7071     98     39     57      A
10     24     59     24   7071      T
11     68   3698     42   3373      y
12   7071     93    132    295      A
Binding TFs: Lhx8_DBD (Homeobox domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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