DNA Binding Motif

Accessions: CG9895_SOLEXA_5_FBgn0034810 (FlyZincFinger 1.0 )
Names: CG9895
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0 1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 11
Consensus: tGGGyGTGGyy
Weblogo:
PSSM: P0 A C G T
01 239 52 200 494 t
02 44 0 921 24 G
03 2 0 957 31 G
04 0 0 959 31 G
05 19 644 0 327 y
06 2 0 961 27 G
07 3 15 212 760 T
08 68 18 818 86 G
09 63 45 781 101 G
10 73 503 29 376 y
11 109 425 126 274 y
Binding TFs: CG9895 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

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