DNA Binding Motif

						

			
Accessions: M0054 (AthalianaCistrome v4_May2016)

			
Names: Rap210.ampDAP, T24614;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: wkTGTCGGyrrarr
Weblogo: 
PSSM: P0      A      C      G      T
01    183     76    114    223      w
02    114     92    149    241      k
03     13     63      3    517      T
04      0      0    596      0      G
05      0      0      1    595      T
06      0    596      0      0      C
07      0      0    596      0      G
08     45      0    551      0      G
09      0    404      0    192      y
10    272     88    152     84      r
11    257     44    215     80      r
12    255    145     85    111      a
13    180    113    156    147      r
14    214     87    157    138      r
Binding TFs: T24614 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.