DNA Binding Motif

						

			
Accessions: GCM2_DLX3_2 (HumanTF2 1.0)

			
Names: GCM2_DLX3
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 18
Consensus: aTrcGGGywrkdtAAttr
Weblogo: 
PSSM: P0      A      C      G      T
01   5865   1430   2327    597      a
02    813    940    514   8192      T
03   3281    624   4911     11      r
04   3568   8192   3419   2529      c
05   1721    173   8192   1561      G
06      4     19   8192     54      G
07     11      2   8192     31      G
08   1241   2574    879   3499      y
09   2368   1501   1866   2457      w
10   2399   1501   2269   2023      r
11   2006   1642   2472   2072      k
12   2340   1457   2185   2210      d
13   2055   1485    502   8192      t
14   8192    781   1863    943      A
15   8192    138    469    316      A
16   1136   1048   1777   8192      t
17   2021   1804   2704   5488      t
18   3564   1193   4629   1978      r
Type: Heterodimer
Binding TFs: DLX3_TF2 (Homeobox domain)
GCM2_TF1 (GCM motif protein)
DLX3_Crystal (Homeobox domain)
DLX3_Full (Homeobox domain, Homeobox protein distal-less-like N terminal )
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.