DNA Binding Motif
| Accessions: | 1pyi_AB (3D-footprint 20231221) |
| Names: | PROTEIN (PYRIMIDINE PATHWAY REGULATOR 1) |
| Organisms: | Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER |
| Length: | 12 |
| Consensus: | CGGnnnnnnccg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 8 70 8 10 C 02 8 8 70 10 G 03 2 2 88 4 G 04 24 24 24 24 n 05 24 24 24 24 n 06 24 24 24 24 n 07 24 24 24 24 n 08 24 24 24 24 n 09 24 24 24 24 n 10 12 60 12 12 c 11 19 39 19 19 c 12 14 14 54 14 g |
| Type: | Heterodimer |
| Binding TFs: | 1pyi_A (Fungal Zn(2)-Cys(6) binuclear cluster domain) 1pyi_B (Fungal Zn(2)-Cys(6) binuclear cluster domain) |
| Binding Sites: | 1pyi_D / 1pyi_E |
| Publications: | Marmorstein R, Harrison S.C. Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear cluster. Genes & development 8:2504-12 (1994). [Pubmed] |
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