DNA Binding Motif

						

			
Accessions: HOXC13_2 (HT-SELEX2 May2017)

			
Names: HOXC13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sCTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   1887   4855   7490   3584      s
02    782  17816   1127      0      C
03     19     66     15  17816      T
04     87  17816      0    404      C
05   1017      0  17816      0      G
06      4      0      3  17816      T
07  17816      0      0   1167      A
08  17816      0      0     44      A
09  17816     56      0     53      A
10  17816   5030   1250   4264      a
11   3431   7584   2081   4720      y
Binding TFs: HOXC13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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