DNA Binding Motif

						

			
Accessions: HOXA13_methyl_5 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sCTCGTAAAah
Weblogo: 
PSSM: P0      A      C      G      T
01   1005   1700   2791   1057      s
02    679   6553    999     25      C
03     82    143    102   6553      T
04     29   6553      0     21      C
05    133      1   6553      0      G
06      1    221      9   6553      T
07   6553     11      0    615      A
08   6553      0      0     54      A
09   6553     61      5      9      A
10   6553   1465    652   1924      a
11   1805   2048    793   1907      h
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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