DNA Binding Motif
| Accessions: | 4kdp_B (3D-footprint 20231221) |
| Names: | TcaR transcription regulator |
| Organisms: | Staphylococcus epidermidis, strain ATCC 12228 / FDA PCI 1200 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | TcaR-ssDNA complex crystal structure reveals the novel ssDNA binding mechanism of the MarR family proteins |
| Length: | 5 |
| Consensus: | CncAg |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0 96 0 0 C 02 24 24 24 24 n 03 13 57 13 13 c 04 96 0 0 0 A 05 13 16 54 13 g |
| Binding TFs: | 4kdp_B (Bacterial regulatory protein, arsR family, MarR family, MarR family, Winged helix DNA-binding domain) |
| Binding Sites: | 4kdp_H |
| Publications: | Chang Y.M, Ho C.H, Chen C.K, Maestre-Reyna M, Chang-Chien M.W, Wang A.H. TcaR-ssDNA complex crystal structure reveals new DNA binding mechanism of the MarR family proteins. Nucleic acids research 42:5314-21 (2014). [Pubmed] |
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