DNA Binding Motif
| Accessions: | MA0284.2 (JASPAR 2024) |
| Names: | CIN5 |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-exo |
| Length: | 14 |
| Consensus: | wrATTACrTAATcw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 110 75 47 113 w 02 95 32 139 79 r 03 240 46 25 34 A 04 3 5 5 332 T 05 3 2 13 327 T 06 334 1 3 7 A 07 4 273 10 58 C 08 223 17 88 17 r 09 1 1 1 342 T 10 321 19 3 2 A 11 329 3 1 12 A 12 25 18 58 244 T 13 76 180 33 56 c 14 145 38 74 88 w |
| Type: | Heterodimer |
| Binding TFs: | P40917 (bZIP transcription factor) P40917 |
| Binding Sites: | MA0284.2.1 MA0284.2.10 / MA0284.2.11 MA0284.2.11 / MA0284.2.12 MA0284.2.12 / MA0284.2.13 / MA0284.2.15 / MA0284.2.19 MA0284.2.13 / MA0284.2.15 / MA0284.2.16 / MA0284.2.19 MA0284.2.14 / MA0284.2.17 / MA0284.2.20 / MA0284.2.8 / MA0284.2.9 MA0284.2.17 MA0284.2.18 MA0284.2.2 MA0284.2.3 MA0284.2.4 MA0284.2.5 / MA0284.2.6 MA0284.2.10 / MA0284.2.6 / MA0284.2.7 / MA0284.2.9 MA0284.2.7 MA0284.2.14 / MA0284.2.20 MA0284.2.16 MA0284.2.18 / MA0284.2.8 MA0284.2.5 |
| Publications: | Badis G, Chan E.T, van Bakel H, Pena-Castillo L, Tillo D, Tsui K, Carlson C.D, Gossett A.J, Hasinoff M.J, Warren C.L, Gebbia M, Talukder S, Yang A, Mnaimneh S, Terterov D, Coburn D, Li Yeo A, Yeo Z.X, Clarke N.D, Lieb J.D, Ansari A.Z, Nislow C, Hughes T.R. A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Molecular cell 32:878-87 (2008). [Pubmed] |
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