DNA Binding Motif
| Accessions: | MA1329.2 (JASPAR 2024) |
| Names: | ZHD1 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 13 |
| Consensus: | wwAyTAATTAAtw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 834 351 309 978 w 02 967 422 333 750 w 03 1813 246 193 220 A 04 386 1155 193 738 y 05 47 24 9 2392 T 06 2412 14 26 20 A 07 2417 15 18 22 A 08 25 29 9 2409 T 09 19 43 12 2398 T 10 2382 14 25 51 A 11 2233 73 60 106 A 12 562 402 473 1035 t 13 691 423 370 988 w |
| Type: | Heterodimer |
| Binding TFs: | Q9SB61 (ZF-HD protein dimerisation region) Q9SB61 |
| Binding Sites: | MA1329.2.1 MA1329.2.10 MA1329.2.11 / MA1329.2.8 MA1329.2.12 MA1329.2.13 / MA1329.2.9 MA1329.2.10 / MA1329.2.14 MA1329.2.11 / MA1329.2.15 MA1329.2.12 / MA1329.2.16 MA1329.2.13 / MA1329.2.17 MA1329.2.15 / MA1329.2.18 MA1329.2.16 / MA1329.2.19 MA1329.2.2 MA1329.2.20 MA1329.2.2 / MA1329.2.3 MA1329.2.4 MA1329.2.5 MA1329.2.5 / MA1329.2.6 MA1329.2.6 / MA1329.2.7 MA1329.2.8 MA1329.2.7 / MA1329.2.9 MA1329.2.14 MA1329.2.17 MA1329.2.18 MA1329.2.19 MA1329.2.20 MA1329.2.3 MA1329.2.4 |
| Publications: | Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed] |
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