DNA Binding Motif

						

			
Accessions: MA2276.1 (JASPAR 2024)

			
Names: Sox21a
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 15
Consensus: aACAmTAmCATTGTt
Weblogo: 
PSSM: P0      A      C      G      T
01    604    178    117     99      a
02    939     16     34      8      A
03      0    999      0      0      C
04    996      0      0      3      A
05    604    391      2      1      m
06      0      1      2    995      T
07    742      5    132    119      A
08    328    340    224    106      m
09      1    995      0      2      C
10    996      2      0      0      A
11      0      2    206    790      T
12      0      0      0    998      T
13      4      0    995      0      G
14      4    134     26    834      T
15     78    102    165    653      t
Binding TFs: M9PFG6
			
Publications: McKimmie C, Woerfel G, Russell S. Conserved genomic organisation of Group B Sox genes in insects. BMC Genet : (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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