DNA Binding Motif

						

			
Accessions: 1jfs_A (3D-footprint 20231221)

			
Names: PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: PURINE REPRESSOR MUTANT-HYPOXANTHINE-PURF OPERATOR COMPLEX
Length: 8
Consensus: CGcanACg
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02      0      0     96      0      G
03     12     60     12     12      c
04     31     21     21     23      a
05     24     24     24     24      n
06     81      4      7      4      A
07      2     90      2      2      C
08     16     16     45     19      g
Binding TFs: 1jfs_A (Bacterial regulatory proteins, lacI family, Periplasmic binding proteins and sugar binding domain of LacI family, Periplasmic binding protein-like domain, Periplasmic binding protein domain)
Binding Sites: 1jfs_B
			
Publications: Huffman J.L, Lu F, Zalkin H, Brennan R.G. Role of residue 147 in the gene regulatory function of the Escherichia coli purine repressor. Biochemistry 41:511-20 (2002). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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