DNA Binding Motif

						

			
Accessions: UN0146.1 (JASPAR 2024)

			
Names: ZBTB40
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 13
Consensus: aaAACTTTATTta
Weblogo: 
PSSM: P0      A      C      G      T
01   7717   1394   1690   2122      a
02   7718   1788   1338   2079      a
03  11435    397    397    694      A
04  11268    184    918    553      A
05    306  11831    297    489      C
06    280    133    101  12409      T
07    250    143    272  12258      T
08    146    158     98  12521      T
09  12315    190    197    221      A
10    453    467    194  11809      T
11   1198   1097    952   9676      T
12   2945   1452   2651   5875      t
13   6734   1416   2328   2445      a
Type: Heterodimer
Binding TFs: Q9NUA8 (Zinc finger, C2H2 type, BTB/POZ domain, Zinc-finger double domain, C2H2-type zinc finger)
Q9NUA8
Binding Sites: UN0146.1.1
UN0146.1.10
UN0146.1.11 / UN0146.1.8
UN0146.1.12 / UN0146.1.9
UN0146.1.13
UN0146.1.10 / UN0146.1.14
UN0146.1.11 / UN0146.1.15
UN0146.1.12 / UN0146.1.16
UN0146.1.13 / UN0146.1.17
UN0146.1.14 / UN0146.1.18
UN0146.1.15 / UN0146.1.19
UN0146.1.2
UN0146.1.20
UN0146.1.3
UN0146.1.4
UN0146.1.5
UN0146.1.5 / UN0146.1.6
UN0146.1.7
UN0146.1.6 / UN0146.1.8
UN0146.1.7 / UN0146.1.9
UN0146.1.16
UN0146.1.17
UN0146.1.18
UN0146.1.19
UN0146.1.20
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.