DNA Binding Motif

						

			
Accessions: 4oor_AB (3D-footprint 20231221)

			
Names: Ancestral Steroid Receptor 2 DNA binding domain
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Ancestral Steroid Receptor 2 DNA binding domain in complex with a steroid response element
Length: 13
Consensus: GnmCAnnnTGnnw
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02     24     24     24     24      n
03     48     24      8     16      m
04      0     96      0      0      C
05     96      0      0      0      A
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09      8      0     16     72      T
10      0      0     96      0      G
11     24     24     24     24      n
12     24     24     24     24      n
13     56      8      8     24      w
Type: Heterodimer
Binding TFs: 4oor_A (Zinc finger, C4 type (two domains))
4oor_B (Zinc finger, C4 type (two domains))
Binding Sites: 4oor_I
4oor_J
			
Publications: McKeown A.N, Bridgham J.T, Anderson D.W, Murphy M.N, Ortlund E.A, Thornton J.W. Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module. Cell 159:58-68 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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