DNA Binding Motif

Accessions: MA1565.2 (JASPAR 2024)
Names: TBX18
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 9
Consensus: AGGTGTGAa
Weblogo:
PSSM: P0 A C G T
01 778 62 159 59 A
02 73 57 778 47 G
03 14 0 778 0 G
04 7 80 0 778 T
05 21 6 778 2 G
06 100 98 109 778 T
07 52 161 778 32 G
08 778 1 5 34 A
09 778 62 265 95 a
Type: Heterodimer
Binding TFs: O95935 (T-box)
O95935
Publications: Farin H. F., Bussen M., Schmidt M. K., Singh M. K., Schuster-Gossler K., Kispert A. Transcriptional repression by the T-box proteins Tbx18 and Tbx15 depends on Groucho corepressors.. J. Biol. Chem. 282:25748-25759 (2007). [Pubmed]

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