DNA Binding Motif
| Accessions: | MA1311.2 (JASPAR 2024) |
| Names: | WRKY28 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 11 |
| Consensus: | wwrGTCAACrw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 929 287 243 633 w 02 901 240 240 711 w 03 919 67 924 182 r 04 21 11 2047 13 G 05 6 8 1 2077 T 06 12 2062 8 10 C 07 2059 17 6 10 A 08 2050 7 18 17 A 09 158 1730 55 149 C 10 596 254 740 502 r 11 694 436 330 632 w |
| Type: | Heterodimer |
| Binding TFs: | Q8VWJ2 (WRKY DNA -binding domain) Q8VWJ2 |
| Binding Sites: | MA1311.2.1 MA1311.2.10 / MA1311.2.7 MA1311.2.11 MA1311.2.12 MA1311.2.13 MA1311.2.14 / MA1311.2.8 MA1311.2.15 / MA1311.2.9 MA1311.2.10 / MA1311.2.16 MA1311.2.11 / MA1311.2.17 MA1311.2.18 MA1311.2.12 / MA1311.2.19 MA1311.2.2 MA1311.2.20 / MA1311.2.9 MA1311.2.2 / MA1311.2.3 MA1311.2.4 MA1311.2.5 MA1311.2.3 / MA1311.2.6 MA1311.2.16 / MA1311.2.19 / MA1311.2.4 / MA1311.2.7 MA1311.2.5 / MA1311.2.8 MA1311.2.13 MA1311.2.14 MA1311.2.15 MA1311.2.17 MA1311.2.18 MA1311.2.20 MA1311.2.6 |
| Publications: | Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.