DNA Binding Motif
| Accessions: | MA2177.1 (JASPAR 2024) |
| Names: | nfya-1 |
| Organisms: | Caenorhabditis elegans |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 10 |
| Consensus: | rACCAATCAG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1173 236 741 253 r 02 1964 86 222 131 A 03 43 2258 24 78 C 04 49 2289 21 44 C 05 2276 30 33 64 A 06 2266 60 43 34 A 07 44 60 22 2277 T 08 89 2135 83 96 C 09 2062 70 192 79 A 10 296 217 1690 200 G |
| Binding TFs: | G5EEG1 |
| Binding Sites: | MA2177.1.1 MA2177.1.10 / MA2177.1.17 / MA2177.1.19 / MA2177.1.2 / MA2177.1.20 / MA2177.1.6 MA2177.1.11 MA2177.1.12 / MA2177.1.13 MA2177.1.14 MA2177.1.15 / MA2177.1.3 / MA2177.1.5 MA2177.1.16 MA2177.1.18 MA2177.1.4 MA2177.1.7 MA2177.1.8 MA2177.1.9 |
| Publications: | Deng H, Sun Y, Zhang Y, Luo X, Hou W, Yan L, Chen Y, Tian E, Han J, Zhang H. Transcription factor NFY globally represses the expression of the C. elegans Hox gene Abdominal-B homolog egl-5 308:583-92 (Dev). [Pubmed] |
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