DNA Binding Motif

						

			
Accessions: 5uan_B (3D-footprint 20231221)

			
Names: Retinoic acid receptor beta
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of multi-domain RAR-beta-RXR-alpha heterodimer on DNA
Length: 5
Consensus: GGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01      7      7     73      9      G
02      0      0     96      0      G
03      7      9      7     73      T
04      9     73      7      7      C
05     73      7      9      7      A
Binding TFs: 5uan_B (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Binding Sites: 5uan_E
5uan_F
			
Publications: Chandra V, Wu D, Li S, Potluri N, Kim Y, Rastinejad F. The quaternary architecture of RARβ-RXRα heterodimer facilitates domain-domain signal transmission. Nat Commun 8:868 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.