DNA Binding Motif

Accessions: 5uan_B (3D-footprint 20231221)
Names: Retinoic acid receptor beta
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of multi-domain RAR-beta-RXR-alpha heterodimer on DNA
Length: 5
Consensus: GGTCA
01 7 7 73 9 G
02 0 0 96 0 G
03 7 9 7 73 T
04 9 73 7 7 C
05 73 7 9 7 A
Binding TFs: 5uan_B (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Binding Sites: 5uan_E
Publications: Chandra V, Wu D, Li S, Potluri N, Kim Y, Rastinejad F. The quaternary architecture of RARβ-RXRα heterodimer facilitates domain-domain signal transmission. Nat Commun 8:868 (2017). [Pubmed]

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