DNA Binding Motif

						

			
Accessions: UN0394.2 (JASPAR 2024)

			
Names: AtPLATZ6
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 14
Consensus: rGAAgmTTCTAGAA
Weblogo: 
PSSM: P0      A      C      G      T
01    580     70    308     42      r
02      5      7    988      0      G
03    968      5      3     23      A
04    922      8     17     53      A
05     75    238    550    137      g
06    288    337    188    187      m
07     98     42     12    848      T
08     13      0      7    980      T
09      3    985      5      7      C
10      0    142     47    812      T
11    778     37    183      2      A
12      2     10    988      0      G
13    960      7      8     25      A
14    700     57    110    133      A
Type: Heterodimer
Binding TFs: A8MQN6 (PLATZ transcription factor)
A8MQN6
			
	
			


			

				

				
				
				
				

			

			

		

	
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