DNA Binding Motif

						

			
Accessions: her_SOLEXA_10_FBgn0001185 (FlyZincFinger 1.0 )

			
Names: CG4694
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: rCGCAwwwrTGAGya
Weblogo: 
PSSM: P0      A      C      G      T
01    212      6    158      5      r
02      5    367      0      9      C
03      6      0    371      5      G
04     29    328     15     10      C
05    274     19     78     11      A
06    163     36     82    101      w
07    112     50     46    174      w
08    111     33     42    196      w
09    202     26    100     54      r
10      3     15      0    364      T
11      0      0    379      3      G
12    371      6      0      5      A
13      2      0    376      4      G
14     63    149      5    119      y
15    201     26     42     54      a
Binding TFs: her (Zinc finger, C2H2 type, C2H2-type zinc finger, C2H2-type zinc-finger domain)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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