DNA Binding Motif

						

			
Accessions: LHX8_5 (HT-SELEX2 May2017)

			
Names: LHX8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TrATTGCAATyA
Weblogo: 
PSSM: P0      A      C      G      T
01    103     73     37   1113      T
02    589     20    524     29      r
03   1113     26     24     13      A
04     44     27     60   1113      T
05     47     46     63   1113      T
06    179     21   1113      5      G
07      7   1113     17    235      C
08   1113     52     49     43      A
09   1113     57     32     46      A
10      2     20     17   1113      T
11     28    465     17    648      y
12   1113     31     74     91      A
Binding TFs: LHX8 (Homeobox domain, LIM domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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