DNA Binding Motif

						

			
Accessions: MA1594.1 (JASPAR 2024)

			
Names: ZNF382
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 24
Consensus: AgGrGAyATyACyACmGAyCCyAC
Weblogo: 
PSSM: P0      A      C      G      T
01   3566    119    342    225      A
02    620    120   2797    715      g
03    305    332   3518     97      G
04   1784     47   2131    290      r
05    276     41   3822    113      G
06   3587    246    307    112      A
07    155   2049    305   1743      y
08   4177     16     44     15      A
09    420    232    163   3437      T
10     93   2762     36   1361      y
11   4192     12     25     23      A
12     58   3882    170    142      C
13    600   1693     31   1928      y
14   4204     16     24      8      A
15     14   4073     39    126      C
16   1957   1446     91    758      m
17    558     43   3578     73      G
18   3943     62    167     80      A
19    122   1605     95   2430      y
20    915   2982    143    212      C
21    184   3607     61    400      C
22    360   2615     88   1189      y
23   3404    153    249    446      A
24    171   3415    143    523      C
Type: Heterodimer
Binding TFs: Q96SR6 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q96SR6
Binding Sites: MA1594.1.1 / MA1594.1.3
MA1594.1.10 / MA1594.1.12
MA1594.1.11 / MA1594.1.13
MA1594.1.12 / MA1594.1.14
MA1594.1.13 / MA1594.1.15
MA1594.1.14 / MA1594.1.16
MA1594.1.15 / MA1594.1.17
MA1594.1.16 / MA1594.1.18
MA1594.1.17
MA1594.1.18 / MA1594.1.19
MA1594.1.19 / MA1594.1.20
MA1594.1.2 / MA1594.1.4
MA1594.1.20
MA1594.1.3 / MA1594.1.5
MA1594.1.4 / MA1594.1.6
MA1594.1.5 / MA1594.1.7
MA1594.1.6 / MA1594.1.8
MA1594.1.7 / MA1594.1.9
MA1594.1.10 / MA1594.1.8
MA1594.1.11 / MA1594.1.9
MA1594.1.1
MA1594.1.2
			
Publications: Schmitges FW, Radovani E, Najafabadi HS, Barazandeh M, Campitelli LF, Yin Y, Jolma A, Zhong G, Guo H, Kanagalingam T, Dai WF, Taipale J, Emili A, Greenblatt JF, Hughes TR. Multiparameter functional diversity of human C2H2 zinc finger proteins. Genome Res 26:1742-1752 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.