DNA Binding Motif

						

			
Accessions: CDX4_methyl_1 (HT-SELEX2 May2017)

			
Names: CDX4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sGTCGTAAAas
Weblogo: 
PSSM: P0      A      C      G      T
01    201   1189   1852    703      s
02    554     88   3945      0      G
03     24     55      0   3945      T
04      0   3945      0     46      C
05    790      2   3945      0      G
06      0      6      0   3945      T
07   3945     20      9      0      A
08   3945     13      7     16      A
09   3945     69      2     62      A
10   1810    912    367    855      a
11    570   1415   1294    666      s
Binding TFs: CDX4 (Homeobox domain, Caudal like protein activation region)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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