DNA Binding Motif

						

			
Accessions: RFX5_HUMAN.H10MO.A|M01485 (HOCOMOCO 10)

			
Names: RFX5
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: RFX-related factors{3.3.3}; RFX5{3.3.3.0.5}
Length: 20
Consensus: stcmbcwGTtgCyrgGsara
Weblogo: 
PSSM: P0      A      C      G      T
01     85    146    232     32      s
02     54     51    116    274      t
03     46    310     78     61      c
04    228    130    103     34      m
05     43    153    147    152      b
06     26    263     93    113      c
07    183     25     85    202      w
08     21      6    450     18      G
09      6     41     57    391      T
10     71    100     33    291      t
11     79      8    327     81      g
12     12    441     15     27      C
13      8    179      8    300      y
14    253     10    220     12      r
15     63     22    335     75      g
16     16     19    432     28      G
17    101    164    165     65      s
18    231     94    100     70      a
19    141     31    249     74      r
20    251     80    117     47      a
Binding TFs: RFX5_HUMAN (RFX DNA-binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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