DNA Binding Motif

						

			
Accessions: KLF10_methyl_1 (HT-SELEX2 May2017)

			
Names: KLF10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 22
Consensus: GmCACrCCCmYGmCACrCCCmC
Weblogo: 
PSSM: P0      A      C      G      T
01   3958   1527  14007    724      G
02   6500  11837    436   1189      m
03     73  18727    492      0      C
04  18096      0    882      0      A
05      0  18945      0      0      C
06   8212      0  10610     36      r
07      0  18926      0      0      C
08      7  18930      0      0      C
09     10  17758      0   3203      C
10   6261  11299    438   2628      m
11    508  13209    274   5305      Y
12   1688   2054  13947   1236      G
13   7235  10552    174   2479      m
14      0  18944      0      0      C
15  18533      0      0      0      A
16      0  18870      0      0      C
17   6078     31  12708      8      r
18      0  18922      0      0      C
19     21  18913     26      0      C
20     60  16668     41   5116      C
21   6433  10995    257   3547      m
22   1240  16596    520   3506      C
Binding TFs: KLF10 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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