DNA Binding Motif

						

			
Accessions: M0093 (AthalianaCistrome v4_May2016)

			
Names: ERF2.ampDAP, T21847;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: cckccgccrcckcCGCCGCCr
Weblogo: 
PSSM: P0      A      C      G      T
01     97    281    107    100      c
02    124    224     93    144      c
03    135     93    199    158      k
04     94    260     88    143      c
05    115    262     75    133      c
06    120     99    231    135      g
07     82    293     90    120      c
08    120    276     57    132      c
09    181     80    206    118      r
10     94    269     87    135      c
11    119    310     31    125      c
12    140     46    192    207      k
13     23    366    111     85      c
14    145    418     18      4      C
15      4      0    579      2      G
16      0    585      0      0      C
17      5    580      0      0      C
18     24      0    555      6      G
19      0    534      4     47      C
20      3    579      0      3      C
21    254      6    236     89      r
Binding TFs: T21847 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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